Matlab繪制散點密度圖的教程詳解

更新時間：2022年02月26日 17:17:03 作者：slandarer

這篇文章主要介紹了如何使用MATLAB繪制散點密度圖(二維核密度)，文中的示例代碼講解詳細，對我們學習Matlab有一定幫助，需要的可以參考一下

效果

原理也很簡單，通過matlab自帶的ksdensity獲得網(wǎng)格每一點密度，通過密度擬合曲面，再計算每個數(shù)據(jù)點對應(yīng)的概率，并將概率映射到顏色即可
為了怕大家找不到函數(shù)這次工具函數(shù)放到最前面

1工具函數(shù)完整代碼

function [CData,h,XMesh,YMesh,ZMesh,colorList]=density2C(X,Y,XList,YList,colorList)
[XMesh,YMesh]=meshgrid(XList,YList);
XYi=[XMesh(:) YMesh(:)];
F=ksdensity([X,Y],XYi);
ZMesh=zeros(size(XMesh));
ZMesh(1:length(F))=F;

h=interp2(XMesh,YMesh,ZMesh,X,Y);
if nargin<5
colorList=[0.2700         0    0.3300
    0.2700    0.2300    0.5100
    0.1900    0.4100    0.5600
    0.1200    0.5600    0.5500
    0.2100    0.7200    0.4700
    0.5600    0.8400    0.2700
    0.9900    0.9100    0.1300];
end
colorFunc=colorFuncFactory(colorList);
CData=colorFunc((h-min(h))./(max(h)-min(h)));
colorList=colorFunc(linspace(0,1,100)');

function colorFunc=colorFuncFactory(colorList)
x=(0:size(colorList,1)-1)./(size(colorList,1)-1);
y1=colorList(:,1);y2=colorList(:,2);y3=colorList(:,3);
colorFunc=@(X)[interp1(x,y1,X,'pchip'),interp1(x,y2,X,'pchip'),interp1(x,y3,X,'pchip')];
end
end

2參數(shù)說明

輸入：

X,Y 散點坐標
XList,YList 用來構(gòu)造密度曲面網(wǎng)格的序列，其實就是把XLim，YLim分成小份，例如XList=0:0.1:10
colorList 顏色表mx3數(shù)組，用來構(gòu)造將高度映射到顏色函數(shù)的數(shù)據(jù)表

輸出：

CData各個點對應(yīng)顏色
h 各個點對應(yīng)核密度
XMesh,YMesh,ZMesh 核密度曲面數(shù)據(jù)
colorList 插值后更細密的顏色表

3使用方式

假如編寫了如下程序：

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];
scatter(PntSet(:,1),PntSet(:,2),'filled');

結(jié)果：

3.1散點賦色

將上面那段代碼改寫

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];

CData=density2C(PntSet(:,1),PntSet(:,2),-2:0.1:15,-2:0.1:15);
scatter(PntSet(:,1),PntSet(:,2),'filled','CData',CData);

3.2等高線圖

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];


[~,~,XMesh,YMesh,ZMesh,colorList]=density2C(PntSet(:,1),PntSet(:,2),-2:0.1:12,-2:0.1:12);
colormap(colorList)
contourf(XMesh,YMesh,ZMesh,10)

3.3帶直方圖的散點圖

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];

colorList=[0.9400    0.9700    0.9600
    0.8900    0.9300    0.9200
    0.8200    0.9100    0.8800
    0.6900    0.8500    0.7700
    0.5900    0.7800    0.6900
    0.5500    0.7500    0.6500
    0.4500    0.6500    0.5600
    0.4000    0.5800    0.4900
    0.3500    0.5100    0.4200
    0.2500    0.3600    0.3100
    0.1300    0.1700    0.1400];
CData=density2C(PntSet(:,1),PntSet(:,2),-2:0.1:15,-2:0.1:15,colorList);

set(gcf,'Color',[1 1 1]);

% 主分布圖
ax1=axes('Parent',gcf);hold(ax1,'on')
scatter(ax1,PntSet(:,1),PntSet(:,2),'filled','CData',CData);
ax1.Position=[0.1,0.1,0.6,0.6];

% X軸直方圖
ax2=axes('Parent',gcf);hold(ax2,'on')
histogram(ax2,PntSet(:,1),'FaceColor',[0.78 0.88 0.82],...
    'EdgeColor','none','FaceAlpha',0.7)
ax2.Position=[0.1,0.75,0.6,0.15];
ax2.YColor='none';
ax2.XTickLabel='';
ax2.TickDir='out';
ax2.XLim=ax1.XLim;

% Y軸直方圖
ax3=axes('Parent',gcf);hold(ax3,'on')
histogram(ax3,PntSet(:,2),'FaceColor',[0.78 0.88 0.82],...
    'EdgeColor','none','FaceAlpha',0.7,'Orientation','horizontal')
ax3.Position=[0.75,0.1,0.15,0.6];
ax3.XColor='none';
ax3.YTickLabel='';
ax3.TickDir='out';
ax3.YLim=ax1.YLim;

3.4帶直方圖的等高線圖

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];
colorList=[0.9300    0.9500    0.9700
    0.7900    0.8400    0.9100
    0.6500    0.7300    0.8500
    0.5100    0.6200    0.7900
    0.3700    0.5100    0.7300
    0.2700    0.4100    0.6300
    0.2100    0.3200    0.4900
    0.1500    0.2200    0.3500
    0.0900    0.1300    0.2100
    0.0300    0.0400    0.0700];
[~,~,XMesh,YMesh,ZMesh,colorList]=density2C(PntSet(:,1),PntSet(:,2),-2:0.1:13,-2:0.1:13,colorList);


set(gcf,'Color',[1 1 1]);
% 主分布圖
ax1=axes('Parent',gcf);hold(ax1,'on')
colormap(colorList)
contourf(XMesh,YMesh,ZMesh,10,'EdgeColor','none')
ax1.Position=[0.1,0.1,0.6,0.6];
ax1.TickDir='out';

% X軸直方圖
ax2=axes('Parent',gcf);hold(ax2,'on')
[f,xi]=ksdensity(PntSet(:,1));
fill([xi,xi(1)],[f,0],[0.34 0.47 0.71],'FaceAlpha',...
    0.3,'EdgeColor',[0.34 0.47 0.71],'LineWidth',1.2)
ax2.Position=[0.1,0.75,0.6,0.15];
ax2.YColor='none';
ax2.XTickLabel='';
ax2.TickDir='out';
ax2.XLim=ax1.XLim;

% Y軸直方圖
ax3=axes('Parent',gcf);hold(ax3,'on')
[f,yi]=ksdensity(PntSet(:,2));
fill([f,0],[yi,yi(1)],[0.34 0.47 0.71],'FaceAlpha',...
    0.3,'EdgeColor',[0.34 0.47 0.71],'LineWidth',1.2)
ax3.Position=[0.75,0.1,0.15,0.6];
ax3.XColor='none';
ax3.YTickLabel='';
ax3.TickDir='out';
ax3.YLim=ax1.YLim;

4使用方式擴展–與ggplot修飾器聯(lián)動

ggplot風格修飾器：(點擊圖片跳轉(zhuǎn)鏈接)

示例1

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];

ax=gca;
ax.XLim=[-1 13];
ax.YLim=[-1 13];
ax=ggplotAxes2D(ax);

CData=density2C(PntSet(:,1),PntSet(:,2),0:0.1:15,0:0.1:15);
scatter(PntSet(:,1),PntSet(:,2),'filled','CData',CData);

是不是瞬間有那味了：

示例2

PntSet1=mvnrnd([2 3],[1 0;0 2],800);
PntSet2=mvnrnd([6 7],[1 0;0 2],800);
PntSet3=mvnrnd([8 9],[1 0;0 1],800);

PntSet=[PntSet1;PntSet2;PntSet3];

ax=gca;
ax.XLim=[-3 13];
ax.YLim=[-3 13];
ax=ggplotAxes2D(ax);

[~,~,XMesh,YMesh,ZMesh,colorList]=density2C(PntSet(:,1),PntSet(:,2),-2:0.1:12,-2:0.1:12);
colormap(colorList)
contourf(XMesh,YMesh,ZMesh,10)